Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLKKHSERKFDLITVGRACIDLNA---VEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTK--AGETFQAQAYKTKVLKTFGAGDSYASAFLYGL---FSD-----------ESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
| 3LKI Chain:A ((7-326)) | ------------ILCFGEALIDMLAQPLVKKGMPR----AFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVR-TSTAKTALAFVAL--HGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEV---PTF----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168755 for 2380 contacts (-70.9/contact) +
2D Compatibility (PS) -30812 + (NN) -10512 + (LL) 2928
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -231351.0 ( -97.21 by residue)
QMean score : 0.514
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