Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALIDEK
2R4Q Chain:A ((170-269))
--AKILAVTACPTG--HTFMAADALKEKAKELGVEIKVETNGSSGIKHKLTAQEIEDAPAIIVAADKQVE-MERFKGKRVLQVPVTAGIRRPQELIEKAMNQD---
General information:
TITO was launched using:
RESULT:
Template:
2R4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31271 for 754 contacts (-41.5/contact) +
2D Compatibility (PS) -10277 + (NN) -2306 + (LL) 760
1D Compatibility (HY) -3200 + (ID) 1850
Total energy: -48144.0 ( -63.85 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_2R4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R4Q-query.scw
PDB file :
Tito_Scwrl_2R4Q.pdb
: