Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTIFPKEQNVTPLFEQILANPTACRR-FKDVFLDNL-ESYQETRGFEKDDTLFAKIILSAYRQSDVSALLL-G-VCG-RTLFELLRQAFLIPKKLTVDNPFFLTDKEGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRINKKRGILVLYSLPDTLKSGMTESEVYAFIWKTFLHIQEIIPSSR-IFYGQETSENADEL-GVFLPIHHFEKKMLQNIEQVNELVDALREQMVNK |
| 3GW4 Chain:A ((8-199)) | --DYALAERQAQALLAH-PATASGARFMLGYVYA--FMDRFDEARASFQALQQQAQ--KSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLP---------------EDPLAASANAYEVATVALHFG-------DLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQ-----------EKNLLEAQQHWLRARDIFAELEDSEAVNELMTRLNGLEH-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 66970 for 1311 contacts (51.1/contact) +
2D Compatibility (PS) -18213 + (NN) 4981 + (LL) 6100
1D Compatibility (HY) 11600 + (ID) 550
Total energy: 70888.0 ( 54.07 by residue)
QMean score : 0.065
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