Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKLYGKRDLRYEEADMPTIEE-PDDVILKVKTVGICGSDISRYS----KLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPNELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFE-KIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKVLFFPE |
| 2DQ4 Chain:A ((17-326)) | -----------------DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVT-GSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPI---RFDLAGELVMRGITAFG----IAGRRLWQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAF------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188037 for 2572 contacts (-73.1/contact) +
2D Compatibility (PS) -31906 + (NN) -6911 + (LL) 3344
1D Compatibility (HY) -18000 + (ID) 4900
Total energy: -246410.0 ( -95.80 by residue)
QMean score : 0.459
|
|
|