Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNVLFIKANGLPAERSVSVALYEIFLTEYKK-SHPDDNVTELDLFEADLPYYDVTMMSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNFSIPAQFLTYLFYLNQAGKTFKYTANGPVGLVAD-KKIALLNARGGIYS-DGPMQSFEMSLNYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF
4M0C Chain:A ((21-189))
----------------SVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVTERMSEILQQFKSANTYVIVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMFNFLGIEDYQIVRAQG--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4M0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83894 for 1111 contacts (-75.5/contact) +
2D Compatibility (PS) -17681 + (NN) -5388 + (LL) 3256
1D Compatibility (HY) -17200 + (ID) 2700
Total energy: -123607.0 ( -111.26 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_4M0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M0C-query.scw
PDB file :
Tito_Scwrl_4M0C.pdb
: