Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELLAEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLSGLEASRLLKYTEYPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI
2WBY Chain:A ((780-852))
-----------------------------------------ELFAQ--IISEPAFNTLRTKEQLGYIVFSGPRR--------------ANGIQGLRFIIQSEKPPHYLESRVEAFLI----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WBY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6112 for 349 contacts (-17.5/contact) +
2D Compatibility (PS) -6670 + (NN) -4244 + (LL) 6524
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -14752.0 ( -42.27 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_2WBY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WBY-query.scw
PDB file :
Tito_Scwrl_2WBY.pdb
: