Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALYRR-GKTKHSICQEFNVPHSTFGKWIKKFNNEENIESNEILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
2JRT Chain:A ((29-79))
-DTRRWVASRKAAVVKAVIHGLITEREALDRYSLSEEEFALWRSAVAA-HGEK------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11134 for 299 contacts (-37.2/contact) +
2D Compatibility (PS) -5057 + (NN) -1305 + (LL) 4324
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -15422.0 ( -51.58 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_2JRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JRT-query.scw
PDB file :
Tito_Scwrl_2JRT.pdb
: