Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVPFVGNVRDGHEFVGQAREMGAVATFWQKNVPNPPTDFPVILVEDTLLALQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAI-VETTYKVHYTGGNF------NNHIGLPYTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIE-YLGSREEIAKAKLEITAGLNPSGILIYPHEETLLLGNINGDFRQLT-FGKSEAAEIYP---LEIRAEAEGTSFITNWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSR--------LEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSSGKP-KYLVLADMLELGDLSTKLHQESAEVLEN-DTIQKVFLYGDAMKAFGEVAESKI----GQGKVHHFDTKESLETA--LLSEIKGNEWILVKGSYGMGLKDVVENLIIK |
| 2F00 Chain:A ((122-469)) | -----------------------------------------------------------------------------------------------------------IAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHL---------------QPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPM-RVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAA----RAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVY-PAGEAPIPGADSRSLCRT-----DPILVPDPARVAEMLAPVLTGNDLILVQGAGNIG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68182 for 2561 contacts (-26.6/contact) +
2D Compatibility (PS) -33245 + (NN) -6661 + (LL) 10948
1D Compatibility (HY) -10800 + (ID) 4400
Total energy: -112340.0 ( -43.87 by residue)
QMean score : 0.312
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