Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILL--ICGSGASSGFMA-AAIRKAAKKRGEQVTVKAASESQIDE-----RINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG
2M1Z Chain:A ((2-104))
KRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVR--N-KERF--DGKVVLEVPVSA-PIKDAEKVINAALALID
General information:
TITO was launched using:
RESULT:
Template:
2M1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39223 for 733 contacts (-53.5/contact) +
2D Compatibility (PS) -10712 + (NN) -7167 + (LL) 436
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -62066.0 ( -84.67 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2M1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M1Z-query.scw
PDB file :
Tito_Scwrl_2M1Z.pdb
: