Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LVKVVFVCLGNICRSPMAEGLFRKEVANAGLTDEIKIDSAATGTWNLGKPPHRGTQEVLKKHGVDYQAMRARKISDADFKEADFIIGMDQQNLADLNALNNNPDVIIRSLMSFVSGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK
4LRQ Chain:A ((2-128))
-QKVLVVCMGNICRSPTAEAVLRAKAAQ--LKVDVEVDSAGTIGYHQGNPPDARSKAAGEKRGYSFSGIKARKIRDEDFVKFDWILAADQENLAELKARCPQSHQHKLSLMLSHSDSEYQEIPDPYYGGE----------------------
General information:
TITO was launched using:
RESULT:
Template:
4LRQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31810 for 992 contacts (-32.1/contact) +
2D Compatibility (PS) -13924 + (NN) -9035 + (LL) 2320
1D Compatibility (HY) -6400 + (ID) 2650
Total energy: -61499.0 ( -61.99 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4LRQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LRQ-query.scw
PDB file :
Tito_Scwrl_4LRQ.pdb
: