Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAILIGVLIILLIAMILIVLLPAILAMVGAVLGFWSLKKLLEARSVGEKVIYGVLIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPYNK
3H75 Chain:A ((323-336))
-----------------------------------------------------------------------------------------SAQGKPDSYRYPFG-
General information:
TITO was launched using:
RESULT:
Template:
3H75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1679 for 40 contacts (42.0/contact) +
2D Compatibility (PS) -1593 + (NN) -2898 + (LL) 10232
1D Compatibility (HY) -800 + (ID) 150
Total energy: 6470.0 ( 161.75 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3H75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H75-query.scw
PDB file :
Tito_Scwrl_3H75.pdb
: