Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSFLLKNLITDKEKPIIVYGHMSPLM--LVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADPSMFICTEELPNNLTITGCPV---LTQDQLMDALEKHFGEVPDKEACVNNDDNYYIIYTSGSTGNPKGVQISQNNLVSFSNWILQDFSLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTLVPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRF-LFCGEVLAKKTASEL--------LDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMRLHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFDYKGYQAYRTGD-SGIIKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPK-MKDEKVDMLVAQVIPTTHDFEKEYQLSAAIKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEVNK |
| 3VNQ Chain:A ((60-533)) | ---------------------------RISYGRLDAWSDAVARTLLAEGVRPGDR---VALRMSPGAEAIVAILAILKCGAAYVPVDLRNPVSRSDFILADSGASALIGE---PHE----GCAVTRVVRTAAVAECKDAE------APGP-GAEDMAYVIYTSGTTGNPKGVPVRHANVLALLAGAPSVFDFSGDDRWLLFHSLSFDFSVWEIWGAFSTGAELVVLPHWAARTPEQYLAVIIDRGVTVINQTPT-AFLALTEAAVRGGRDVSGLRYVIFGGE---KLTAPMLRPWAKAFGLDR---PRLVNGYGITETTVFTTFEEITEAYLAQDASI-IGRALPSFGTRVVGDDGRDVAP-GETGELWLSGAQLAEGYLRRPELTAEKFPEV--VRYYRTGDLVSELPDGRFAYEGRADLQIKLRGYRIELSDIETAVRRHDDVVDAVVTVREFKPGDLRLVCAYVA-----REGSATTARELRNHIKTLLPAYMHPARYLPLPGLPRTVNGKVDRAAV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183150 for 3718 contacts (-49.3/contact) +
2D Compatibility (PS) -47415 + (NN) -14520 + (LL) 3720
1D Compatibility (HY) -26800 + (ID) 7450
Total energy: -275615.0 ( -74.13 by residue)
QMean score : 0.401
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