Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNGLHITGVATSEETNKQAQNLGIPLKSLNDVTEIDITIDGADEIDTDFQGIKGGGGALLREKMVASASLKNIWVVSEEKLVRNLGKFPLPLEVIPFGWKQVERKLEKEHIQTNLRKQSSGEVYVTNNGNYILDIVNQTFTDAEMWQEKLAQIPGIVEHGLFLHY-VDIIICAKANGEIELIKK
1O8B Chain:A ((23-218))
--------------------IVGVGTGST-----------------EGAVSSSDA------------FDLNEVDSLGIYVDGADEINGHMQMIKGGG-ALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQG-----VVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV--
General information:
TITO was launched using:
RESULT:
Template:
1O8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56374 for 1359 contacts (-41.5/contact) +
2D Compatibility (PS) -18134 + (NN) -6745 + (LL) 3416
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -94937.0 ( -69.86 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1O8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O8B-query.scw
PDB file :
Tito_Scwrl_1O8B.pdb
: