Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIFYIPFVVFVPLTAISIGLIIGGLIGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENFLEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSVSQQLFAAMMLLSALNEQSEKS----------ATPAMQKQL-KMVESIVNESQSEMRALLLHLRPTQLEGKSLKTGIEQLLKELT---TKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHS----------KAKLLEVRLVTMDN------LAVMKVVDDGVGFDMDNVRQG-SYGLQNMRERVAEFGGTIKIISFPGRGTSVEIKIPLVAKKDVESE |
| 4Q20 Chain:A ((35-254)) | ---------------------------------------------------------------------------------------------------------------------------------------------------EAERLKRDFVGNVSYELRTPLTTIIGYSELLERADSERGRNHVAAVRAAATQLARSIDDVLDMAQIDAGEMALEIEDIRVSDLLLNAQ-ERALKDAQLGGVTLAVECE---EDVGLIRGDGKRLAQTLDHLVENALRQTPPGGRVTLSARRALGEVRLDVSDTGRGVPFHVQAHIFDRFVGRD----RGGPGLGLALVKALVELHGGWVALESEPGNGSTFTCHLP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28055 for 1283 contacts (-21.9/contact) +
2D Compatibility (PS) -20319 + (NN) -3286 + (LL) 14504
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -47756.0 ( -37.22 by residue)
QMean score : 0.390
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