Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGE-KNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGD---IGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEV--NSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSS-V-LKNVDSQELKGEGEMIY-SES-YGFDLYYFAPDKTDLERIITMFKKSLDITE |
2XXP Chain:A ((125-383)) | -------------------------------------------------------------------SKNQSFNIYVSGIDTYGPISSVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIY-GVDSSIHTLENLYG-VDINYYVRLNFTSFLKMIDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGFVRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYSTIINSLQDSIQTNVPLETMINLVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVME--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53676 for 1962 contacts (-27.4/contact) +
2D Compatibility (PS) -26510 + (NN) -2576 + (LL) 5452
1D Compatibility (HY) -17200 + (ID) 3350
Total energy: -97860.0 ( -49.88 by residue)
QMean score : 0.420
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