Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDFDYA-SYYHADVTIHSGTFNECRNADIVVFF----QEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFENKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 3PQE Chain:A ((2-304)) | -NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEHGDTELPVWSHANVGGVPV-SELVEKNDAYKQEELDQIVDDV-KNAAYHIIEKKGATY-YGVAMSLARITKAILHNENSILTVSTYLDGQYGADD-VYIGVPAVVNRGGIAGITELNLNEKEKEQFLHSAG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PQE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252782 for 2461 contacts (-102.7/contact) +
2D Compatibility (PS) -31742 + (NN) -12429 + (LL) 1404
1D Compatibility (HY) -21600 + (ID) 4400
Total energy: -321549.0 ( -130.66 by residue)
QMean score : 0.626
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