Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYTITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEPPEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLK-IASSNEEVLKYVNRLSDYFFAVARVVNYRAGETDIFYKNSELVFRNKKK
1WOZ Chain:A ((19-171))
---------------------GKDSPLVNFLGDLDELNSFIGFAISKIPWE-DMKKDLERVQVELFEIGEDLSTQSSKK--KIDEKYVKWLEERTVEYRKESGPVKLFVIPGGSEEASVLHVTRSVARRVERNAVKYTKELPEINRMIIVYLNRLSSLLFAMALVANKRRNVSEKIY------------
General information:
TITO was launched using:
RESULT:
Template:
1WOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58660 for 1153 contacts (-50.9/contact) +
2D Compatibility (PS) -16657 + (NN) -6519 + (LL) 1936
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -96900.0 ( -84.04 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_1WOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WOZ-query.scw
PDB file :
Tito_Scwrl_1WOZ.pdb
: