Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATNKKEIIRLLEEIATYMELKGENSFKISAFRKAAQAIELDSRSLSEIDDFTKISGIGKTTGEIIQRYLDSGECPELEELKKEVPAGLVPLLD-VPGLGGKKLSRLYHELGVVDKDTLLQEAENGHIE--ALKGFGKKSAEKMAEAVREMGERPDRYPLNDVLPIIQKVEA-YLAEIAPIETFAQAGSLRRLRETVKDLDYVI--------ATEKPE---DVQKALLAFPLITDVIGAGETKVSAVLE--------DNITISVDFRLVEKKAFATTLHHFTGSKDHNIKMRQLAKQSNEKISEY-----GVEQEDGTVRHFESEKTFFEHFKIPFLPPEVRRDGTEIERVTKDTKFLELSDIRGDLHMHTTWSDGAYAIPEMIEACIAKGYEYMVITDHGKFLRVANGLDEKRLLEQQAEIKKIAAKYPEIDVYSGVEMDILADGSLDFDDETLKQLDFVIASIHSSFQQSEEEIMKRLKTACENPYVRLIAHPTGRIVVKRKPYHVNMKELIQLAKSTGTALELNANPQRLDLNREHLEMAHAAGVPIAINTDAHDTKHLDFMSIGVRAATKAWLGKSAILNTKTAAEFKQFLQNK |
| 4MF2 Chain:A ((5-323)) | -------ITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDI--------VLNEVKKVDSEYIATV--------CGSFRRGAESSGDMDVLLTHPSFTSE----PKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100192 for 2033 contacts (-49.3/contact) +
2D Compatibility (PS) -30703 + (NN) -9918 + (LL) 21144
1D Compatibility (HY) -14400 + (ID) 4100
Total energy: -138169.0 ( -67.96 by residue)
QMean score : 0.431
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