Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPGRGFYIVKSVEACEKAKKKNAIFHQLKMPEQESFYDELIAYVK-SLEEPTNG
3L9A Chain:X ((9-88))
--------RDFFVITN--SEYTFAGVHYAKGAVLHVSPT---QKRAFWVIADQENFIKQVNKNIEYVEKNAS--PAFLQRIVEIYQVKFEGKNVH
General information:
TITO was launched using:
RESULT:
Template:
3L9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16133 for 526 contacts (-30.7/contact) +
2D Compatibility (PS) -8327 + (NN) -966 + (LL) 1132
1D Compatibility (HY) -6400 + (ID) 700
Total energy: -31394.0 ( -59.68 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_3L9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9A-query.scw
PDB file :
Tito_Scwrl_3L9A.pdb
: