Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSRFFSDV-AET--SSFVFAVAGADDEVVLETIRLALKQKLGKFLLFGKKEDKT------LTANESVTWIQTDTAE---------------------------AAAQGAILAVKNKEADILVKGFIPT-ATLMHHVLKKENGLRTD-QLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENALAVAHQIGITNPKIALLSAVEEVTAK---MPSTLEAQEVVQHFGNQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAK-VGSAVVGAKVPIVISSRNDSPENKLASFILTVRLVEK |
| 1R5J Chain:A ((2-327)) | -SIRSLFGGLREKILGKNMKIVFPEGNDERVVRAAARLKFEGLLEPIILGQSEEVRNLLTKLGFADQDYTIINPNEYADFDKMKEAFVEVRKGKATLEDADKMLRDVNYFGVMLVKMGLADGMVSGAIHSTADTVRPALQ-IIKTKPGISRTSGVFLMNRENTSERYVFADCAINIDPTAQELAEIAVNTAETAKIFDI-DPKIAMLSFSTKGSGKAPQVDKVREATEIATGLNPDLALDGELQFDAAFVPETAAIKAPDSAVAGQANTFVFPDLQSGNIGYKIAQRLGMFDAIGPILQGLNKPVNDLSRGSSAEDIYKLAIITAAQAI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40071 for 2289 contacts (17.5/contact) +
2D Compatibility (PS) -27438 + (NN) 9185 + (LL) 456
1D Compatibility (HY) 12800 + (ID) 1100
Total energy: 33974.0 ( 14.84 by residue)
QMean score : -0.014
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