Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPA-MNTDQI-VKKMQEGKTVAPAKLVIPEG-YTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIKAYPETVTNDVLNKSIKHPLEGYLYPATY-TFKGTDVSAEQIITEMVKA-TDVNIAKYRDELTKQKMSVHKFLTM-SSIIEKEATENVDRKMIASVFYNRLAKD-MRLQTDPTVLYA-LGEHKSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN-----
2R1F Chain:A ((11-270))-------------------------------------------------------------------------------------HFKAGTYRFTPQMTV--REMLKLLESGKEA-QFPLRLVEGMRLSDYLKQLREAPYIK----HTLSDDKYATVAQAL-------------ELENPEWIEGWFWPDTWMYTANT--TDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGMR-LQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVAD-GKGGHTFNTNLASHNKSVQDYLKVLKEKNAQ


General information:
TITO was launched using:
RESULT:

Template: 2R1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6868 for 1781 contacts (3.9/contact) +
2D Compatibility (PS) -26640 + (NN) -11078 + (LL) 8256
1D Compatibility (HY) -5200 + (ID) 3750
Total energy: -31544.0 ( -17.71 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_2R1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R1F-query.scw
PDB file : Tito_Scwrl_2R1F.pdb: