Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVLYFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE
1UJ8 Chain:A ((4-76))
---SHHHHHHGSGLKWTDSREIGEALYDAYPDLDPKTVR-----------------FTDMHQWICDLED----FDDDPQASNEKILEAILLVWLDEA---
General information:
TITO was launched using:
RESULT:
Template:
1UJ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 20085 for 490 contacts (41.0/contact) +
2D Compatibility (PS) -7855 + (NN) -4365 + (LL) 1604
1D Compatibility (HY) -2800 + (ID) 800
Total energy: 5869.0 ( 11.98 by residue)
QMean score : 0.254
(partial model without unconserved sides chains):
PDB file :
Tito_1UJ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UJ8-query.scw
PDB file :
Tito_Scwrl_1UJ8.pdb
: