Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2XUL Chain:A ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQT-------YTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
2XUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50288 for 682 contacts (-73.7/contact) +
2D Compatibility (PS) -11418 + (NN) -5421 + (LL) 428
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -73799.0 ( -108.21 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_2XUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XUL-query.scw
PDB file :
Tito_Scwrl_2XUL.pdb
: