Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPRKVMIIGAGNVGTAAAHAFVNQKFVEELILVDLNKERVEGNRKDLADAAAF-MPGKMDITVRDASDCADVDIAVITVTAGPLKEGQTRLDELRSTSRIVSGIVPEMMKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWLDTTRLRRLLAEKLDIAAQSIDAFILGEHGDSQFPVWSHSSIYGKPVNEY--SLEKLGESLDLKQIGETARDTGFEIYHQKGCTEYGIGGTIVEICRHIFSGSQRALTVSCVLDGEYGESGLAIGVPAVLSQNGVKEIISLKLDEQEQQAFANSVSVIKKSIASI
4M1Q Chain:A ((26-329))-KTSRVVIIGTGAVGSSYAFSMINQNVTDEMVLIDLDKRKTEGDAMDLNHGIPFGAPTK--VWAGDYGDCKSADIVVITAGAAQ-KPGETRLDLVEKNANIFKGIVDQVMGSGFNGIFIIATNPVDVLAYATWKFSGLPKERVIGSGTILDTARFRFLLSEYFDIDVRNIHGYIMGEHGDTELPVWSQTRIGSEPISRYMDKYKPDGSNKDLDEIFVNVRDAAYHIIERKGATHYAIAMGLARLTKAILRNEQSILTVSTLMEGEYDLDDVYIGVPAIVSQKGVERAIEIDLNDEEMKKLHHSSNTLK------


General information:
TITO was launched using:
RESULT:

Template: 4M1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -253484 for 2580 contacts (-98.2/contact) +
2D Compatibility (PS) -32212 + (NN) -7901 + (LL) 1076
1D Compatibility (HY) -27600 + (ID) 6300
Total energy: -326421.0 ( -126.52 by residue)
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_4M1Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1Q-query.scw
PDB file : Tito_Scwrl_4M1Q.pdb: