Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFGIPAE--KDAVGTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVI-ENGEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGFYD-IPIMSYAVKYASAFYGPFRDAAGSAPQFGDRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKN-NTNLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK |
| 1E51 Chain:A ((13-328)) | -------HPLLRAWQTA-----TTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLS--GAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E51.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199429 for 2637 contacts (-75.6/contact) +
2D Compatibility (PS) -34130 + (NN) -14231 + (LL) 1048
1D Compatibility (HY) -26400 + (ID) 6950
Total energy: -280092.0 ( -106.22 by residue)
QMean score : 0.606
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