Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVIISIGGDGAFLKSVRETGFRQDCL-YAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLVRRYPTI-----YGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTGSTAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGNNEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL |
3V8P Chain:A ((27-262)) | -------------------------------YDMEYDDVEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIH-TGHLGFYADWRPAEADKLVKLLAKGEYQKVSYPLLKTTVKY----KEATYLALNESTVKSSG-GPFVVDVVINDIHFERFRGDGLCMSTPSGTTAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVF-PKHHV---VSLQPVNDKDFQISVDHLSILHRDVQEIRYEVSAKKIHFARFRSFPFWRRVHDSFI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81691 for 1710 contacts (-47.8/contact) +
2D Compatibility (PS) -24215 + (NN) -2185 + (LL) 3464
1D Compatibility (HY) -19200 + (ID) 4000
Total energy: -127827.0 ( -74.75 by residue)
QMean score : 0.307
|
|
|