Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELIKGNIASPKGFYADGKHAGLKRK-RNDIGWIYSEVPANAAAVYTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLEIPLDSVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEA---ILTTDTFQKQISFQTEIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAI-PAELLQKLLKIKVDKTFNQITVDGDTSTNDMVVVMANGCAENPMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKLIEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPD--NITIKIGGIEILNHSSQTIYNQQALDA----YLEEEHIIIEVDLHIGLESGTAWGCDLSYEYVKINACYRT |
| 1VZ7 Chain:C ((8-390)) | ---------TPRGFVVHTAPVGLADDGRDDFTVLASTA--TVSAVFTRSRFAGPSVVLCREAV-ADGQARGVVVLARNANVATGLEGEENAREVREAVARA---PEGEMLIASTGVIGRQYPMESIREHLKTLEW--------DRAARAIMTTDTRPKEV--RV-------TLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQ-DRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLA-------GEVDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP-------DDALRAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161976 for 3028 contacts (-53.5/contact) +
2D Compatibility (PS) -37999 + (NN) -17832 + (LL) 3392
1D Compatibility (HY) -23200 + (ID) 6750
Total energy: -244365.0 ( -80.70 by residue)
QMean score : 0.384
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