Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALEEKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSVIRYHK--------FLGQLIDGYTSIA-------------ITGSHGKTSTTGLLSHVVGAIRPTSYLIGDGTGS---------GTKDAEYFALEACEYQR---HFLA--YKPTYAIMTNIDWDHPDYFKSVDDVFNAFETL--GKQVKKAVFALGDDAELRKLTLDIPIIYFGFGEENEFQAKNVIKETTGTKFDVYHREEFL-SSFEIPAYGDHNVLNALSVIALCDYEGLPVEDVKNELKTFEGVKRR--FSITEKGNQVLVDDYAHHPSEIRATVNAARQKYPDKKVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKGNHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN |
| 2AM1 Chain:A ((10-330)) | --------------------------QVVGAKNDISIF-----EDTQLEKAEFDSRLIGTGDLFVPLKGARDGHDFIETAFENGAAVTLSEKEVSNHPYILVDDVLTAFQSLASYYLEKTTVDVFAVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIGLPYTVLHMPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKGKMQIADGMASGSLLLAPADPIVEDYLPIDKKVVRFGQGAELE------ITDLVERKDSLTFKANFLEQALDLPVTGKYNATNAMIASYVALQEGVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPT--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93145 for 2072 contacts (-45.0/contact) +
2D Compatibility (PS) -29867 + (NN) -11183 + (LL) 13044
1D Compatibility (HY) -5600 + (ID) 3650
Total energy: -130401.0 ( -62.93 by residue)
QMean score : 0.351
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