Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYT----------ELIANELGTKAFYESIKD--------NRILEMFYDDPKRWAFALQIYFLNTRFR----SIKAALTDQNN---VLDRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
4Q19 Chain:A ((41-246))
-----IKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWS-------LTMEQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASL-GKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFG--QSLELDGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4Q19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82524 for 1206 contacts (-68.4/contact) +
2D Compatibility (PS) -17877 + (NN) -4407 + (LL) 2912
1D Compatibility (HY) -14000 + (ID) 3050
Total energy: -118946.0 ( -98.63 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_4Q19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Q19-query.scw
PDB file :
Tito_Scwrl_4Q19.pdb
: