Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQPYMKNEQVLVTLKSS-----------------------NINQFSDM-KNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNI---ITGGFDATDFAVGMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ |
| 4P0I Chain:A ((5-259)) | ------------------------------------KSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTS-------HEAFMKQMMPSVQISTYDTIDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASPKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60926 for 1819 contacts (-33.5/contact) +
2D Compatibility (PS) -24587 + (NN) -9425 + (LL) 3608
1D Compatibility (HY) -16800 + (ID) 3450
Total energy: -111580.0 ( -61.34 by residue)
QMean score : 0.460
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