Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKEFNII--DTGGIDLSDEPFLEQI--RAQAEIA---IDEADVIIFITNGREGVTDADEQVAKILYRS-NKPIVLAINKVDN-------PEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAVRAHFPKEEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTYTFDGQDYVMIDTAGMRKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDKRIAGYAHDAGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQRLNNLFPLINQVSDNHSLRVQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKPPTFVVFVNDPELMHFSYERFLENRIREAFPFEGTPIRVIARKRK |
| 3R9X Chain:A ((12-191)) | -----VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKN-IPNEAQIIFLDTPGI---YEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHP-ELTEIVPISALKGANLDELVKTILKYLP-EGEPLFPEDMI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83692 for 1193 contacts (-70.2/contact) +
2D Compatibility (PS) -17887 + (NN) -4292 + (LL) 20192
1D Compatibility (HY) -14400 + (ID) 3150
Total energy: -103229.0 ( -86.53 by residue)
QMean score : 0.561
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