Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNGQLV-----RLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAV-LFLIIQALMGMA---AVVWGQ--NPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKLRVNIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAAFILIVWLLYVTWLVFRDYRRYRVL----TFSMVLSLVFIALQA--VTGALSVYTGVNLYIALAHSLIITMLFALLCYLCLLASRSKSNRLRIK |
| 4PWO Chain:A ((1-250)) | -TQAEKTATDLPPGFSG----KAGSVNATPGTKGLDGPTPLADGSFDATIFGPAKELKSADDILNVHR-----------------------RNAKDPFAVGAVDAPLVITEFSDFECPFCARWSNQTEPTLMEE--------YVSKGLVRIEWNDLPVN------------GEHALAAAKAGRAAAAQGKFDEFRKALFEAS--RNVSGHP------NNTLKDFERFARNAGV-----------KDMERFSREAQDSTYDEVLAKAADYAHGLGVSGTPAFVVG-TQYISGAQP---TEEFIKVIESELKKSPTFSTPSSH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218013 for 1792 contacts (-121.7/contact) +
2D Compatibility (PS) -23791 + (NN) -189 + (LL) 8424
1D Compatibility (HY) 7200 + (ID) 2500
Total energy: -228869.0 ( -127.72 by residue)
QMean score : 0.292
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