Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEEYQKAVQSLYAIAYTIKMSKMGETRLNGYADFVVPPLEGFWWSEEKFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAQKKKPDVDTSRVKLVRFEEGECVQMMHIGPF-SEEVKTVAELHQFMETEGLHNDTGAVRKHHEIYLSDPRKADPEKMKTILRLPVS |
1JYH Chain:A ((4-71)) | ---------------------------------------------------------------------------------------------------------------------------------------EIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDSKNIVP-----KEWVAVYYDNPDETPAEKLRCDTVVTV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9681 for 392 contacts (-24.7/contact) +
2D Compatibility (PS) -7357 + (NN) -4108 + (LL) 9764
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -15482.0 ( -39.49 by residue)
QMean score : 0.447
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