Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAK-DIEIGDVENKKIDGPAGKIPIRIYTPQE-DGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIR--SKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATDETYELISEFLEEK
4OB7 Chain:A ((19-307))-------------------------------GVEQHTQAFLEALEQGGGKPLEQLSP---KDAR----AVLTGAQASVKVDLSGIEVKERTIQANGQSIKLQVVRPANVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPESHYPTAINQAYAATQWVAEHGKEIGVDGKRLAVAGNSVGGNMAAVVALKAKEAGTPALRFQLLLHPVT-----DASFETASYKQFADGHFLTTGMMKWFWDNYTTDAKARE-QIYASPLRASSEQLKGLPPALVQTAEFDVLRDEGEAYARKLNAAGVTVTSVRYNGMIHDYGLLN------------------


General information:
TITO was launched using:
RESULT:

Template: 4OB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115039 for 2467 contacts (-46.6/contact) +
2D Compatibility (PS) -30398 + (NN) -11814 + (LL) 6064
1D Compatibility (HY) -18800 + (ID) 5450
Total energy: -175437.0 ( -71.11 by residue)
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_4OB7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OB7-query.scw
PDB file : Tito_Scwrl_4OB7.pdb: