Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAK-DIEIGDVENKKIDGPAGKIPIRIYTPQE-DGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIR--SKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATDETYELISEFLEEK |
4OB7 Chain:A ((19-307)) | -------------------------------GVEQHTQAFLEALEQGGGKPLEQLSP---KDAR----AVLTGAQASVKVDLSGIEVKERTIQANGQSIKLQVVRPANVKGELPVFMFFHGGGWVLGDFPTHQRLIRDLVVGSGAVAVYVDYTPSPESHYPTAINQAYAATQWVAEHGKEIGVDGKRLAVAGNSVGGNMAAVVALKAKEAGTPALRFQLLLHPVT-----DASFETASYKQFADGHFLTTGMMKWFWDNYTTDAKARE-QIYASPLRASSEQLKGLPPALVQTAEFDVLRDEGEAYARKLNAAGVTVTSVRYNGMIHDYGLLN------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115039 for 2467 contacts (-46.6/contact) +
2D Compatibility (PS) -30398 + (NN) -11814 + (LL) 6064
1D Compatibility (HY) -18800 + (ID) 5450
Total energy: -175437.0 ( -71.11 by residue)
QMean score : 0.531
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