Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTKKRGLMLLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGKPVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKNVPDKIKYLAEK
2ZFK Chain:A ((57-143))
---------------------WSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE--KDQQ------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 19433 for 294 contacts (66.1/contact) +
2D Compatibility (PS) -5937 + (NN) -958 + (LL) 5372
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 14760.0 ( 50.20 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_2ZFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZFK-query.scw
PDB file :
Tito_Scwrl_2ZFK.pdb
: