Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKFKQQLIKYLKLFFGFIGKWLNKGWQKFRRFWKNKHIGKIFLLAGLVFLLSFIIYLVIVAKSADIDALKKGLESATIIYDKDGDKAGELSSTDATFVSIDKISKNLQNAVVSIEDRKFYEHKGFDLKGIARAGVNLVTSGGISGGGSTITQQLAKNALLTQEQTFTRKAKEIFMAREIEKTYSKDEIMEMYLNRSYFGNGEWGVENASLKYFGKSAADLNIPEAATIAGLLQAPSAYDPYQHIDKATNRRNMVLNAMVETGTISKAEGDKYKATKIVLNDQSKDPLANKYPWYVDAVINEAVNEADI-TQDEIMQKGYKIYTELDQNYQTSLENVYNNDGL--FPSNANDGTLVQSGAVLMDPATGGIRALVGGRGE--HVFRGFNRATQMKAQPGSTMKPLAVYTPALQSG-YD-VDSMLKDEKITYKGNYTPT-NVGGVYSGEVPMYKAVANSINAPAVWLLDQIGIDKGVKSVEKFGITVPEKDRTLGLALGGMSK----GASPVEMATAYATFANNGAKPESHIITKIVDPSGNT-VYENVPKTKQIISETVSNEMTSMLLDVINTGTGQSAAVSGHEMAGKTGSTQVPFDDTSG--------TKDQWFVGYTPNLVGAVWMGYDKTDKEHYLTTTSSAGVSSLAHYVMNSGLQYQKSADFSTKSAAQETAAKKEEEEKEKNSGSDFWSGVKEKADEAGETIKKGADKVKEFGGKVSDGIGNLIDSIGN |
2ZC6 Chain:B ((4-336)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NYPAYMDNYLKEVINQVEEETGYNLLTTGMDVYTNVDQEAQKHLWDIYNTDEYVAYPDDE-----LQVASTIVDVSNGKVIAQLGARHQSSNVSFGINQAVETNRDWGSTMKPITDYAPALEYGVYDSTATIVHDEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETLNKVGLNRAKTFLNGLGIDYPSIHYSNAISSNTTESDKKYGASSEKMAAAYAAFANGGTYYKPMYIHKVVFSDGSEKEFSNV--GTRAMKETTAYMMTDMMKTVLSYGTGQNAYLAWLPQAGKTGTSNYTDEEIENHIKTSQFVAPDELFAGYTRKYSMAVWTGY--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69759 for 2655 contacts (-26.3/contact) +
2D Compatibility (PS) -33589 + (NN) -10848 + (LL) 24640
1D Compatibility (HY) -16800 + (ID) 5250
Total energy: -111606.0 ( -42.04 by residue)
QMean score : 0.399
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