Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQW-------------GTAED--RTAEQQKKEQTTFHMARLFGVKHINCGLLE-----KIPEEQIIVALGELCDRA---EELIIGLEFMPYSGVADLQAAWRVAEACGRDNAQLICDTWHWARAN-QTAES-IKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDEAWPEISPR |
| 3TVA Chain:A ((9-288)) | --------PYWPIGVFTSV---DAGLGVHLEVAQDLKVPTVQVHAPHPHTR--TREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRAS-RVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHG-QAVHLETGQ----ESADHLLEFIEDVNRPNLGINFDPANMILYGTGNPIEALRK-VARYVRSIHCKDALWAPVNE-RGKSWGQEVALGTGDVGMEAYLTTLWEI-GYRGPLTIEREIPHDP-VQQKKDLASALELLTGLRKKIA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99838 for 2078 contacts (-48.0/contact) +
2D Compatibility (PS) -27560 + (NN) -14384 + (LL) 1276
1D Compatibility (HY) -2400 + (ID) 1750
Total energy: -144656.0 ( -69.61 by residue)
QMean score : 0.479
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