Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
1EBO Chain:A ((3-30))
------QIEDKIEEILSKIYHIENEIARIKKLIG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3375 for 103 contacts (32.8/contact) +
2D Compatibility (PS) -3301 + (NN) -3773 + (LL) 3996
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -1903.0 ( -18.48 by residue)
QMean score : 0.668
(partial model without unconserved sides chains):
PDB file :
Tito_1EBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EBO-query.scw
PDB file :
Tito_Scwrl_1EBO.pdb
: