Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKK----YDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
3U3W Chain:A ((161-221))
----------------------------------------------------------------------IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNK-----------------
General information:
TITO was launched using:
RESULT:
Template:
3U3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3109 for 322 contacts (-9.7/contact) +
2D Compatibility (PS) -6102 + (NN) -4461 + (LL) 6980
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -11192.0 ( -34.76 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_3U3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U3W-query.scw
PDB file :
Tito_Scwrl_3U3W.pdb
: