Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAGKTNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENGLIEIENWEKHQNVDGMERVREQTRKRVEKHREAMRQNRIASGDSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVTSEQGANKRNYAYVNKILKNWESRGFKTIADVDAAEKQRQIELEQKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA |
| 1FT9 Chain:A ((162-206)) | --------------------------------------------------------VDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16436 for 246 contacts (-66.8/contact) +
2D Compatibility (PS) -4812 + (NN) -2167 + (LL) 19272
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -6693.0 ( -27.21 by residue)
QMean score : 0.169
|
|
|