Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVVWSKEGCHYCKDVKDFL----IEQKIV-FQDIDVTDH-DYLREVLQAKYGICHVPVVEIGNIENGTYQAVTEIGLEHLEKALFEKGEVK
1JHB Chain:A ((13-76))
-GKVVVFIKPTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYLQQLTGARTVPRVFIG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JHB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42065 for 352 contacts (-119.5/contact) +
2D Compatibility (PS) -5996 + (NN) -450 + (LL) 2448
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -52413.0 ( -148.90 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1JHB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JHB-query.scw
PDB file :
Tito_Scwrl_1JHB.pdb
: