Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGM-----NDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLTFIKSNANFDAE--------AIKSKINATAGVSAEDKQKIIDAIQADLDKETQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSIHQAINGSGSQTLLGGANQLTAGLKSAQAGSAKLVAGTNQLNSQVPTLTSGVGQLAAGSASMENGLSKLNDGGNKLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSNQLAGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELTDKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGALVFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDSIVEFFGTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHPFLPMTYSIYAFRESLAAGMGPNVYSMSMLILTIIMVACVGLLYLSMSHLKKRHDAHESALDDNQKLMALEN |
3K8V Chain:A ((44-243)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAAGL-AISDRMTAQIKGLTQAQRNANDGI-SLAQTAEGALGEISNNLQRIRELAVQASNGTNTQTDRD--ALQAEVTQLQSEIQRVAEQTSFNGQKLLDGSFNGVQFQIGANAGETI-GVSKIMNAQTASLGGSLTRTTSTIDATD-----LTKYDTAMAAGDLTINGVDVGKIDAASTA-----QERAAQLTEAINRVSSQTNVGASYDKTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 29413 for 1084 contacts (27.1/contact) +
2D Compatibility (PS) -19017 + (NN) 166 + (LL) 41688
1D Compatibility (HY) -1200 + (ID) 2500
Total energy: 48550.0 ( 44.79 by residue)
QMean score : 0.211
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