Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDRWWMDFGGG
3EFD Chain:K ((142-151))
-------------RALHERFDRL-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EFD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -659 for 30 contacts (-22.0/contact) +
2D Compatibility (PS) -906 + (NN) -24 + (LL) 2180
1D Compatibility (HY) -800 + (ID) 250
Total energy: -459.0 ( -15.30 by residue)
QMean score : -0.691
(partial model without unconserved sides chains):
PDB file :
Tito_3EFD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EFD-query.scw
PDB file :
Tito_Scwrl_3EFD.pdb
: