Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKHIVLIVVACI-------TVIAVFMYIVQINNSELKYQNRAQIKIASQMASQNEQTDNSIVSEITYK
4A94 Chain:C ((3-53))
-----VPDDRPCINPGRCPLVPDATCTFVCKAADNDFGYECQHVWTFEGQRVGCYA-------------
General information:
TITO was launched using:
RESULT:
Template:
4A94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24714 for 212 contacts (-116.6/contact) +
2D Compatibility (PS) -4709 + (NN) 1006 + (LL) 1456
1D Compatibility (HY) -400 + (ID) 300
Total energy: -27661.0 ( -130.48 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_4A94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A94-query.scw
PDB file :
Tito_Scwrl_4A94.pdb
: