Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQEKQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMVKPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVGGKELHLTTSEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENVIKTIWGVGYKIEI
2A9P Chain:A ((4-118))
----ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSV-PILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRR---------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A9P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86539 for 922 contacts (-93.9/contact) +
2D Compatibility (PS) -12323 + (NN) -8545 + (LL) 9160
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -112697.0 ( -122.23 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_2A9P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9P-query.scw
PDB file :
Tito_Scwrl_2A9P.pdb
: