Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRTAQKKGEDFVVFFFTPMCGSCQ-IASRLVDVVIEADGIQTEVAKVNLNYVPDIAQSLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
2O7K Chain:A ((21-85))
-----------LVDFWATWCGPCKMIAPVLEELAADYEG-KADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVD------------------
General information:
TITO was launched using:
RESULT:
Template:
2O7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63340 for 369 contacts (-171.7/contact) +
2D Compatibility (PS) -6897 + (NN) -2290 + (LL) 2672
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -75755.0 ( -205.30 by residue)
QMean score : 0.723
(partial model without unconserved sides chains):
PDB file :
Tito_2O7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O7K-query.scw
PDB file :
Tito_Scwrl_2O7K.pdb
: