Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRRSAAPREEEQIEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGGENSSKDREDSMRNMVNDLSQAGE----------KIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDTTLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEET-LRFESKSKQIVTNLTVYLPRREYDYVSVKMLNG-NFHMDELSGRDLFVKTTNGN---ISIGTLNATLAEIES-INGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGNVNYQLTGNEATFLKAKTGAGNIDVVVPATIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSITFTKLPNAADSSLKIEAEATTGSVKIR------DVK------ |
| 1OKE Chain:A ((1-394)) | M-----RCIGISNRDFVEGVSGGSWVDIVLEHGSCVTTMA------------------KNKPTLDFELIKTEAKQP---ATLRKYCIEAKLTNTTTESRCPTQGEPTLNEEQDKRFVCKHSMVDRGWGNGCGLFGKGGIVTCAMFTCKKNMEGKIVQPENLEYTVVITPHSGE----EHAVGNDTGKHGKEVKITPQS--------SITEAELTGYGTVTMECSPRTGLDFNEMVLLQMKDKAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHAKKQDVVVLGSQEGAMHTALTGATEIQMSSGNLLFTGHLKCRLRMD--------KLQLKGMSYSMCTGKFKVVKEIAETQHGTIVIRVQYEGDG----SPCKIPFEIMDLE----KRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 117890 for 2774 contacts (42.5/contact) +
2D Compatibility (PS) -36756 + (NN) 17804 + (LL) 4336
1D Compatibility (HY) -14400 + (ID) 3000
Total energy: 85874.0 ( 30.96 by residue)
QMean score : 0.069
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