Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------------MDQIISALIFPCLLVILFARITYNRYVGLLLMVILIAASAKLGYTSSMWLIIIDAFSMTIGFVLATYMLRRLKKSGSDF
1BIH Chain:A ((99-209))
YLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIV----TKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGY
General information:
TITO was launched using:
RESULT:
Template:
1BIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62749 for 378 contacts (-166.0/contact) +
2D Compatibility (PS) -7623 + (NN) 2150 + (LL) 668
1D Compatibility (HY) 0 + (ID) 500
Total energy: -68054.0 ( -180.04 by residue)
QMean score : -0.042
(partial model without unconserved sides chains):
PDB file :
Tito_1BIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BIH-query.scw
PDB file :
Tito_Scwrl_1BIH.pdb
: