Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS------EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK
3DOY Chain:A ((14-151))
---IEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAEL---------
General information:
TITO was launched using:
RESULT:
Template:
3DOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75678 for 967 contacts (-78.3/contact) +
2D Compatibility (PS) -13975 + (NN) -2542 + (LL) 964
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -107531.0 ( -111.20 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_3DOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DOY-query.scw
PDB file :
Tito_Scwrl_3DOY.pdb
: