Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGAKVSVQINGVARDVVEGTRMLDYLNAEGIQHPHICYSEQIGPIQSCDTCMCEVDGELMRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVCDNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQVQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFMTGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEASMRETRTKKTKTVCTFCGVGCTFEVWTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWEDAIHLVATKLREIQAKYGNDSL---GFISSSKTTNEEN-YLMQKLARQVFETNNIDNCSRYCQAPASDGLTRTVGIGADSGTVEDIESAGLVIIVGASPAD-------GHPVLASRIKRAQKTR---------GQKLIVSDLRKH------EMAERSDLFIH--PKQGTDFVWLTAVAKYMIDQGWHDEVFMENRI------------------SNVADYLAFLEP-----FTLEYAEKETGLSVETLKKVAQMV----HEADGTAVCWGM--GVTQNIAGSHTSSAIANLLLVTGNFGRHGAGAYPLRGH-------NNVQGACDMGSLPNVLPGIQP-----LGNDEVRA-----RFEEAYGVSISSEPGLKNNEML-DAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQ-DVFLSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVARACGRT----------------DWNYDHPSEIMDEIASLAPFFAGVRYDRMQ--GFNSLVWPVSA--DGK---DMPLLYEERFNFPDGKAQFSTLPYIAPITFP------EEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVEVSHELAKERDLESGSLVRLSSPYGRIKLRAVVTDRMKGNEVYVPMHSVSSETAVNLLTSSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDYQPISKVNCACGGNCGCGGKGRNH |
| 4AAY Chain:A ((121-831)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QQRLTDPLVWRYGQMQPTSWDDALDLVARVTAKIVKEKGEDALIVSAFDHGGAGGGYENTWGTGKLYFEAMKVKNIRIHNRPAYNSEVHG-TRDMGVGELNNCYEDAELADTIVAVGTNALETQTNYFLNHWIPNLRGESLGKKKELMPEEPHEAGRIIIVDPRRTVTVNACEQTAGADNVLHLAINSGTDLALFNALFTYIADKGWVDRDFIDKSTLREGTARPPLYPARGVSEANPGHLSSFEDAVEGCRMSIEEAAEITGLDAAQIIKAAEWIGMPKEGGKRRRVMFGYEKGLIWGNDNYRTNGALVNLALATGNIGRPGGGVVRLGGHQEGYVRPSDAHVGRPAAYVDQLLIGGQGGVHHIWGCDHYKTTLNAHEFKRVY---------KKRTDMVKDAMSAAPY------GDREAMV----NAIVDAINQGGLFAVNVDIIPTKIGEACHVILPAATSGEMNLTSMNGERRMRLTERYMDPPGQSMPDCLIAARLANTMERVLTEMGDVGYAAQFKGFDWQTEEDA-FMDGYNKNAHGGEFVTYERLSAMGTNGFQEPATGFTDGKIEGTQRLYTDGVFSTDDGKARFMDAPWRG-LQAPGKQQQKDSHKYLINNGRANVVWQSAYLDQENDFVMDRFPYPFIEMNPEDMAEAGLKEGDLVEIYNDAGATQAMAYPTPTARRGETFMLF---GFPTGVQGNVTSAGTNELIIPNYKQTWGNIRKISDAPRN---------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153911 for 5263 contacts (-29.2/contact) +
2D Compatibility (PS) -65273 + (NN) -19419 + (LL) 20848
1D Compatibility (HY) -16800 + (ID) 8650
Total energy: -243205.0 ( -46.21 by residue)
QMean score : 0.409
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